Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_3179 (sodB)

Gene Feature Overview

Strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1 GCF_000219605.1|latest
Locus Tag	PSTAB_3179
Name	sodB
Replicon	chromosome
Genomic location	3394829 - 3395410 (+ strand)

Cross-References

RefSeq	YP_004715549.1
GI	339495256
Entrez	10944222
INSDC	AEJ06460.1
NCBI Locus Tag	PSTAB_3179
UniParc	UPI00014FE6E4
UniProtKB Acc	F8H9Q3
UniProtKB ID	F8H9Q3_PSEUT
UniRef100	UniRef100_A4VP69
UniRef50	UniRef50_P84612
UniRef90	UniRef90_A4VP69

Product

Feature Type	CDS
Coding Frame	1
Product Name	superoxide dismutase
Synonyms
Evidence for Translation
Charge (pH 7)	-5.39
Kyte-Doolittle Hydrophobicity Value	-0.263
Molecular Weight (kDa)	21.3
Isoelectric Point (pI)	5.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 529 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003959 (531 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAB_3179 Search term: sodB Search term: superoxide dismutase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000356022 superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] E-value: 3.1e-42 Percent Identity: 44.3
Ensembl 110, assembly GRCh38.p14	ENSP00000446252 superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] E-value: 3.1e-42 Percent Identity: 44.3

References