Pseudomonas stutzeri ATCC 17588 = LMG 11199, PSTAB_4213 (thdF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri ATCC 17588 = LMG 11199 - Assembly GCF_000219605.1
GCF_000219605.1|latest
Locus Tag
PSTAB_4213
Name
thdF
Replicon chromosome
Genomic location 4543992 - 4545359 (- strand)

Cross-References

RefSeq YP_004716583.1
GI 339496290
Entrez 10945256
INSDC AEJ07494.1
NCBI Locus Tag PSTAB_4213
UniParc UPI000215DC2F
UniProtKB Acc F8H7Q8
UniProtKB ID F8H7Q8_PSEUT
UniRef100 UniRef100_F8H7Q8
UniRef50 UniRef50_Q9CLQ1
UniRef90 UniRef90_A4VS81

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA modification GTPase TrmE
Synonyms
Evidence for Translation
Charge (pH 7) -19.27
Kyte-Doolittle Hydrophobicity Value -0.060
Molecular Weight (kDa) 48954.8
Isoelectric Point (pI) 4.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 606 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005098 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAB_4213
Search term: thdF

Human Homologs

Ensembl 110, assembly GRCh38.p14
GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880]
E-value: 1.2e-60
Percent Identity: 37.8
Ensembl 110, assembly GRCh38.p14
GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880]
E-value: 1.2e-60
Percent Identity: 37.8

References

No references are associated with this feature.