Pseudomonas stutzeri DSM 4166, PSTAA_0269 (ldhA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest
Locus Tag
PSTAA_0269
Name
ldhA
Replicon chromosome
Genomic location 302934 - 303923 (- strand)

Cross-References

RefSeq YP_005936932.1
GI 386018908
Entrez 12527410
INSDC AEA82190.1
NCBI Locus Tag PSTAA_0269
UniParc UPI0002047880
UniProtKB Acc F2MXR2
UniProtKB ID F2MXR2_PSEU6
UniRef100 UniRef100_F2MXR2
UniRef50 UniRef50_Q0KB10
UniRef90 UniRef90_A0A098FV73

Product

Feature Type CDS
Coding Frame 1
Product Name
D-lactate dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.72
Kyte-Doolittle Hydrophobicity Value 0.110
Molecular Weight (kDa) 35.5
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
vanH gene in vanD cluster Also known as vanHD, is a vanH variant in the vanD gene cluster. [PMID:12499162, PMID:16323116] ARO:3002944 protein homolog model Strict 200.7 37.82 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000893 (1006 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAA_0269
Search term: ldhA

Human Homologs

References

No references are associated with this feature.