Pseudomonas stutzeri DSM 4166, PSTAA_0513 (rpoZ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest
Locus Tag
PSTAA_0513
Name
rpoZ
Replicon chromosome
Genomic location 566567 - 566830 (- strand)

Cross-References

RefSeq YP_005937175.1
GI 386019151
Entrez 12527654
INSDC AEA82433.1
NCBI Locus Tag PSTAA_0513
UniParc UPI00014FEB91
UniProtKB Acc F2MWL6
UniProtKB ID F2MWL6_PSEU6
UniRef100 UniRef100_A4VGR5
UniRef50 UniRef50_A7HGP4
UniRef90 UniRef90_A4VGR5

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA-directed RNA polymerase subunit omega
Synonyms
Evidence for Translation
Charge (pH 7) -11.04
Kyte-Doolittle Hydrophobicity Value -0.383
Molecular Weight (kDa) 9.8
Isoelectric Point (pI) 3.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 253 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004906 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAA_0513
Search term: rpoZ

Human Homologs

References

No references are associated with this feature.