Strain |
Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest |
Locus Tag |
PSTAA_0723
|
Name |
rplC
|
Replicon | chromosome |
Genomic location | 806260 - 806895 (+ strand) |
RefSeq | YP_005937375.1 |
GI | 386019351 |
Entrez | 12527865 |
INSDC | AEA82633.1 |
NCBI Locus Tag | PSTAA_0723 |
UniParc | UPI00014FED76 |
UniProtKB Acc | F2MVW0 |
UniProtKB ID | F2MVW0_PSEU6 |
UniRef100 | UniRef100_A4VHN0 |
UniRef50 | UniRef50_A2SLF7 |
UniRef90 | UniRef90_Q889X1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
50S ribosomal protein L3
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 9.90 |
Kyte-Doolittle Hydrophobicity Value | -0.344 |
Molecular Weight (kDa) | 22.7 |
Isoelectric Point (pI) | 10.65 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 90.0 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 90.0 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 90.0 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 90.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001447 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSTAA_0723
Search term: rplC
Search term: 50S ribosomal protein L3
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value:
3.2e-24
Percent Identity:
32.7
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value:
3.2e-24
Percent Identity:
32.7
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value:
3.2e-24
Percent Identity:
32.7
|