Strain |
Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest |
Locus Tag |
PSTAA_1403
|
Name |
csrA
|
Replicon | chromosome |
Genomic location | 1477107 - 1477292 (+ strand) |
RefSeq | YP_005938054.1 |
GI | 386020030 |
Entrez | 12528545 |
INSDC | AEA83312.1 |
NCBI Locus Tag | PSTAA_1403 |
UniParc | UPI0000389325 |
UniProtKB Acc | F2N026 |
UniProtKB ID | F2N026_PSEU6 |
UniRef100 | UniRef100_A4VJB5 |
UniRef50 | UniRef50_Q5E7G3 |
UniRef90 | UniRef90_A4VJB5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
carbon storage regulator
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 0.46 |
Kyte-Doolittle Hydrophobicity Value | -0.402 |
Molecular Weight (kDa) | 6.9 |
Isoelectric Point (pI) | 7.70 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
rsmA | rsmA is a gene that regulates virulence of Pseudomonas aeruginosa. However, its negative effect on MexEF-OprN overexpression has been noted to confer resistance to various antibiotics. It's Escherichia coli homolog is csrA. [PMID:16622241, PMID:11673439] | ARO:3005069 | protein homolog model | Strict | 115.5 | 98.36 | 3.2.5 |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7YR7 | RNA BINDING PROTEIN/RNA | 08/09/22 | Cryo-EM structure of Pseudomonas aeruginosa RsmZ RNA in complex with three RsmA protein dimers | Pseudomonas aeruginosa | 3.8 | ELECTRON MICROSCOPY | 100.0 |
1VPZ | RNA BINDING PROTEIN | 11/24/04 | Crystal structure of a putative carbon storage regulator protein (csra, pa0905) from pseudomonas aeruginosa at 2.05 A resolution | Pseudomonas aeruginosa | 2.05 | X-RAY DIFFRACTION | 98.1 |
7YR6 | RNA BINDING PROTEIN/RNA | 08/09/22 | Cryo-EM structure of Pseudomonas aeruginosa RsmZ RNA in complex with two RsmA protein dimers | Pseudomonas aeruginosa | 4.8 | ELECTRON MICROSCOPY | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 227 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000872 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSTAA_1403
Search term: csrA
Search term: carbon storage regulator
|