Pseudomonas stutzeri DSM 4166, PSTAA_2326 (clpA)

Gene Feature Overview

Strain	Pseudomonas stutzeri DSM 4166 GCF_000195105.1|latest
Locus Tag	PSTAA_2326
Name	clpA
Replicon	chromosome
Genomic location	2499392 - 2501662 (- strand)

Cross-References

RefSeq	YP_005938956.1
GI	386020932
Entrez	12529469
INSDC	AEA84214.1
NCBI Locus Tag	PSTAA_2326
UniParc	UPI00014FECE2
UniProtKB Acc	F2N5S0
UniProtKB ID	F2N5S0_PSEU6
UniRef100	UniRef100_A4VLV6
UniRef50	UniRef50_P0ABI1
UniRef90	UniRef90_Q4K9U8

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent Clp protease, ATP-binding subunit ClpA
Synonyms
Evidence for Translation
Charge (pH 7)	-18.51
Kyte-Doolittle Hydrophobicity Value	-0.249
Molecular Weight (kDa)	83.5
Isoelectric Point (pI)	5.55

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 601 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002932 (531 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSTAA_2326 Search term: clpA Search term: ATP-dependent Clp protease, ATP-binding subunit ClpA

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000294053 caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664] E-value: 2.6e-36 Percent Identity: 32.2
Ensembl 110, assembly GRCh38.p14	ENSP00000340385 caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664] E-value: 2.6e-36 Percent Identity: 32.2
Ensembl 110, assembly GRCh38.p14	ENSP00000441518 caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664] E-value: 2.6e-36 Percent Identity: 32.2

References