Pseudomonas stutzeri DSM 4166, PSTAA_3725 (trpS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest |
| Locus Tag |
PSTAA_3725
|
| Name |
trpS
|
| Replicon | chromosome |
| Genomic location | 3979697 - 3981055 (- strand) |
Cross-References
| RefSeq | YP_005940327.1 |
| GI | 386022302 |
| Entrez | 12530872 |
| NCBI Locus Tag | PSTAA_3725 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
tryptophanyl-tRNA synthetase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -11.93 |
| Kyte-Doolittle Hydrophobicity Value | -0.227 |
| Molecular Weight (kDa) | 49892.9 |
| Isoelectric Point (pI) | 5.06 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 604 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004028 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSTAA_3725
Search term: trpS
Search term: tryptophanyl-tRNA synthetase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
tryptophanyl tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:12730]
E-value:
9.8e-39
Percent Identity:
31.8
|
References
No references are associated with this feature.