Pseudomonas stutzeri DSM 4166, PSTAA_3801

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 4166
GCF_000195105.1|latest
Locus Tag
PSTAA_3801
Name
Replicon chromosome
Genomic location 4065685 - 4068210 (- strand)

Cross-References

RefSeq YP_005940399.1
GI 386022374
Entrez 12530952
INSDC AEA85657.1
NCBI Locus Tag PSTAA_3801
UniParc UPI0002047930
UniProtKB Acc F2N1D4
UniProtKB ID F2N1D4_PSEU6
UniRef100 UniRef100_F2N1D4
UniRef50 UniRef50_B6IT84
UniRef90 UniRef90_A0A098FXR3

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent helicase HrpB
Synonyms
Evidence for Translation
Charge (pH 7) -4.61
Kyte-Doolittle Hydrophobicity Value -0.234
Molecular Weight (kDa) 92481.8
Isoelectric Point (pI) 6.43

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 315 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001718 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSTAA_3801

Human Homologs

Ensembl 110, assembly GRCh38.p14
DExH-box helicase 34 [Source:HGNC Symbol;Acc:HGNC:16719]
E-value: 3.7e-55
Percent Identity: 34.0

References

No references are associated with this feature.