Pseudomonas stutzeri CCUG 29243, A458_02545

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri CCUG 29243
GCF_000267545.1|latest
Locus Tag
A458_02545
Name
Replicon chromosome
Genomic location 569195 - 569737 (+ strand)

Cross-References

RefSeq YP_006456188.1
GI 392419584
EC Number 3.1.-.-
Entrez 13145272
INSDC AFM31765.1
NCBI Locus Tag A458_02545
UniParc UPI0002660F02
UniProtKB Acc I4CNV8
UniProtKB ID I4CNV8_PSEST
UniRef100 UniRef100_I4CNV8
UniRef50 UniRef50_P45340
UniRef90 UniRef90_A4VR15

Product

Feature Type CDS
Coding Frame 1
Product Name
oligoribonuclease
Synonyms
Evidence for Translation
Charge (pH 7) -4.62
Kyte-Doolittle Hydrophobicity Value -0.451
Molecular Weight (kDa) 20.6
Isoelectric Point (pI) 5.60

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004566 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: A458_02545
Search term: oligoribonuclease

Human Homologs

Ensembl 110, assembly GRCh38.p14
RNA exonuclease 2 [Source:HGNC Symbol;Acc:HGNC:17851]
E-value: 1.4e-44
Percent Identity: 49.4

References

No references are associated with this feature.