Pseudomonas stutzeri CCUG 29243, A458_04295

Gene Feature Overview

Strain	Pseudomonas stutzeri CCUG 29243 GCF_000267545.1|latest
Locus Tag	A458_04295
Name
Replicon	chromosome
Genomic location	961014 - 962027 (- strand)

Cross-References

RefSeq	YP_006456534.1
GI	392419930
Entrez	13147848
INSDC	AFM32111.1
NCBI Locus Tag	A458_04295
UniParc	UPI0002660B82
UniProtKB Acc	I4CPV4
UniProtKB ID	I4CPV4_PSEST
UniRef100	UniRef100_I4CPV4
UniRef50	UniRef50_Q9HUW1
UniRef90	UniRef90_A0A098FYS3

Product

Feature Type	CDS
Coding Frame	1
Product Name	NifR3 family TIM-barrel protein
Synonyms
Evidence for Translation
Charge (pH 7)	0.84
Kyte-Doolittle Hydrophobicity Value	-0.136
Molecular Weight (kDa)	36680.5
Isoelectric Point (pI)	7.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 562 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004481 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: A458_04295 Search term: NifR3 family TIM-barrel protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000491438 dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517] E-value: 4.8e-22 Percent Identity: 33.8
Ensembl 110, assembly GRCh38.p14	ENSP00000265720 dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517] E-value: 4.8e-22 Percent Identity: 33.8

References