Strain |
Pseudomonas stutzeri CCUG 29243
GCF_000267545.1|latest |
Locus Tag |
A458_18090
|
Name |
rplC
|
Replicon | chromosome |
Genomic location | 3880954 - 3881589 (- strand) |
RefSeq | YP_006459266.1 |
GI | 392422662 |
Entrez | 13146181 |
INSDC | AFM34843.1 |
NCBI Locus Tag | A458_18090 |
UniParc | UPI000266030E |
UniProtKB Acc | I4CXN6 |
UniProtKB ID | I4CXN6_PSEST |
UniRef100 | UniRef100_I4CXN6 |
UniRef50 | UniRef50_A2SLF7 |
UniRef90 | UniRef90_Q889X1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
50S ribosomal protein L3
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | 9.90 |
Kyte-Doolittle Hydrophobicity Value | -0.371 |
Molecular Weight (kDa) | 22.6 |
Isoelectric Point (pI) | 10.65 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6SPD | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.28 | ELECTRON MICROSCOPY | 91.3 |
7UNR | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 91.5 |
6SPG | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from a clinical isolate | Pseudomonas aeruginosa | 3.34 | ELECTRON MICROSCOPY | 91.3 |
6SPF | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate | Pseudomonas aeruginosa | 2.89 | ELECTRON MICROSCOPY | 91.3 |
7UNU | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.9 | ELECTRON MICROSCOPY | 91.5 |
7UNW | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.6 | ELECTRON MICROSCOPY | 91.5 |
6SPB | RIBOSOME | 09/01/19 | Pseudomonas aeruginosa 50s ribosome from a clinical isolate with a mutation in uL6 | Pseudomonas aeruginosa | 2.82 | ELECTRON MICROSCOPY | 91.3 |
7UNV | RIBOSOME | 04/11/22 | Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A) | Escherichia coli; Pseudomonas aeruginosa PAO1; SYNTHETIC CONSTRUCT | 2.7 | ELECTRON MICROSCOPY | 91.5 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 622 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001447 (534 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: A458_18090
Search term: rplC
Search term: 50S ribosomal protein L3
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value:
1.4e-24
Percent Identity:
33.2
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value:
1.4e-24
Percent Identity:
33.2
|
Ensembl
110, assembly
GRCh38.p14
|
mitochondrial ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10379]
E-value:
1.4e-24
Percent Identity:
33.2
|