Pseudomonas stutzeri DSM 10701, PSJM300_02535 (hemC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 10701
GCF_000279165.1|latest
Locus Tag
PSJM300_02535
Name
hemC
Replicon chromosome
Genomic location 562372 - 563310 (+ strand)

Cross-References

RefSeq YP_006522943.1
GI 397685624
EC Number 2.5.1.61
Entrez 13328939
INSDC AFN76585.1
NCBI Locus Tag PSJM300_02535
UniParc UPI00026D807D
UniProtKB Acc I6ZBL9
UniProtKB ID I6ZBL9_PSEST
UniRef100 UniRef100_I6ZBL9
UniRef50 UniRef50_Q4K3X3
UniRef90 UniRef90_F8H8K5

Product

Feature Type CDS
Coding Frame 1
Product Name
porphobilinogen deaminase
Synonyms
Evidence for Translation
Charge (pH 7) -4.97
Kyte-Doolittle Hydrophobicity Value -0.047
Molecular Weight (kDa) 33417.9
Isoelectric Point (pI) 5.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 586 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004841 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSJM300_02535
Search term: hemC

Human Homologs

Ensembl 110, assembly GRCh38.p14
hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
E-value: 1.4e-63
Percent Identity: 43.5
Ensembl 110, assembly GRCh38.p14
hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
E-value: 1.4e-63
Percent Identity: 43.5
Ensembl 110, assembly GRCh38.p14
hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
E-value: 1.4e-63
Percent Identity: 43.5
Ensembl 110, assembly GRCh38.p14
hydroxymethylbilane synthase [Source:HGNC Symbol;Acc:HGNC:4982]
E-value: 1.4e-63
Percent Identity: 43.5

References

No references are associated with this feature.