Pseudomonas stutzeri DSM 10701, PSJM300_13850 (ispF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 10701
GCF_000279165.1|latest
Locus Tag
PSJM300_13850
Name
ispF
Replicon chromosome
Genomic location 3027542 - 3028015 (- strand)

Cross-References

RefSeq YP_006525190.1
GI 397687871
EC Number 4.6.1.12
Entrez 13327889
INSDC AFN78832.1
NCBI Locus Tag PSJM300_13850
UniParc UPI00026D6947
UniProtKB Acc I6Z6S0
UniProtKB ID I6Z6S0_PSEST
UniRef100 UniRef100_I6Z6S0
UniRef50 UniRef50_Q2S211
UniRef90 UniRef90_I6Z6S0

Product

Feature Type CDS
Coding Frame 1
Product Name
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -0.84
Kyte-Doolittle Hydrophobicity Value -0.006
Molecular Weight (kDa) 16901.2
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 520 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002047 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSJM300_13850
Search term: ispF

Human Homologs

References

No references are associated with this feature.