Pseudomonas stutzeri DSM 10701, PSJM300_15300 (truB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri DSM 10701
GCF_000279165.1|latest
Locus Tag
PSJM300_15300
Name
truB
Replicon chromosome
Genomic location 3337821 - 3338738 (- strand)

Cross-References

RefSeq YP_006525480.1
GI 397688161
Entrez 13328419
INSDC AFN79122.1
NCBI Locus Tag PSJM300_15300
UniParc UPI00026D73B5
UniProtKB Acc I6Z7I6
UniProtKB ID I6Z7I6_PSEST
UniRef100 UniRef100_I6Z7I6
UniRef50 UniRef50_Q8XZV4
UniRef90 UniRef90_A4VPN8

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA pseudouridine synthase B
Synonyms
Evidence for Translation
Charge (pH 7) -1.40
Kyte-Doolittle Hydrophobicity Value -0.234
Molecular Weight (kDa) 33553.9
Isoelectric Point (pI) 6.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 658 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004387 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSJM300_15300
Search term: truB

Human Homologs

Ensembl 110, assembly GRCh38.p14
TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
E-value: 1.6e-37
Percent Identity: 41.6

References

No references are associated with this feature.