Pseudomonas stutzeri DSM 10701, PSJM300_16325

Gene Feature Overview

Strain	Pseudomonas stutzeri DSM 10701 GCF_000279165.1|latest
Locus Tag	PSJM300_16325
Name
Replicon	chromosome
Genomic location	3556694 - 3557578 (- strand)

Cross-References

RefSeq	YP_006525681.1
GI	397688362
Entrez	13325877
INSDC	AFN79323.1
NCBI Locus Tag	PSJM300_16325
UniParc	UPI00026D7D11
UniProtKB Acc	I7ACT2
UniProtKB ID	I7ACT2_PSEST
UniRef100	UniRef100_I7ACT2
UniRef50	UniRef50_D8IXT2
UniRef90	UniRef90_I7ACT2

Product

Feature Type	CDS
Coding Frame	1
Product Name	23S RNA-specific pseudouridylate synthase
Synonyms
Evidence for Translation
Charge (pH 7)	3.98
Kyte-Doolittle Hydrophobicity Value	-0.418
Molecular Weight (kDa)	34073.8
Isoelectric Point (pI)	7.98

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 555 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003402 (526 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSJM300_16325 Search term: 23S RNA-specific pseudouridylate synthase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000323288 RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180] E-value: 1.9e-14 Percent Identity: 28.2
Ensembl 110, assembly GRCh38.p14	ENSP00000453036 RNA pseudouridine synthase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24180] E-value: 1.9e-14 Percent Identity: 28.2

References