Pseudomonas stutzeri DSM 10701, PSJM300_17265
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas stutzeri DSM 10701
GCF_000279165.1|latest |
| Locus Tag |
PSJM300_17265
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 3747782 - 3748324 (- strand) |
Cross-References
| RefSeq | YP_006525866.1 |
| GI | 397688547 |
| EC Number | 3.1.-.- |
| Entrez | 13326044 |
| NCBI Locus Tag | PSJM300_17265 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
oligoribonuclease
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.62 |
| Kyte-Doolittle Hydrophobicity Value | -0.276 |
| Molecular Weight (kDa) | 20385.0 |
| Isoelectric Point (pI) | 5.05 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004566 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSJM300_17265
Search term: oligoribonuclease
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
RNA exonuclease 2 [Source:HGNC Symbol;Acc:HGNC:17851]
E-value:
7.3e-46
Percent Identity:
50.0
|
References
No references are associated with this feature.