Pseudomonas mendocina ymp, Pmen_0142

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina ymp
GCF_000016565.1|latest
Locus Tag
Pmen_0142
Name
Replicon chromosome
Genomic location 142477 - 143601 (+ strand)

Cross-References

RefSeq YP_001185648.1
GI 146305183
Entrez 5106822
NCBI Locus Tag Pmen_0142

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome c oxidase subunit II
Synonyms
Evidence for Translation
Charge (pH 7) -8.26
Kyte-Doolittle Hydrophobicity Value 0.013
Molecular Weight (kDa) 41.8
Isoelectric Point (pI) 5.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 397 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000103 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pmen_0142

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrially encoded cytochrome c oxidase II [Source:HGNC Symbol;Acc:HGNC:7421]
E-value: 1.1e-31
Percent Identity: 32.6

References

No references are associated with this feature.