Pseudomonas mendocina NK-01, MDS_0054

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0054
Name
Replicon chromosome
Genomic location 67419 - 68390 (+ strand)

Cross-References

RefSeq YP_004377837.1
GI 330500968
Entrez 10454836
INSDC AEB56085.1
NCBI Locus Tag MDS_0054
UniParc UPI000206E984
UniProtKB Acc F4DV70
UniProtKB ID F4DV70_PSEMN
UniRef100 UniRef100_F4DV70
UniRef50 UniRef50_P55664
UniRef90 UniRef90_A0A028VCS5

Product

Feature Type CDS
Coding Frame 1
Product Name
ectoine utilization protein EutB
Synonyms
Evidence for Translation
Charge (pH 7) -6.98
Kyte-Doolittle Hydrophobicity Value 0.159
Molecular Weight (kDa) 33867.4
Isoelectric Point (pI) 5.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 584 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016770 (37 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0054

Human Homologs

Ensembl 110, assembly GRCh38.p14
serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
E-value: 6.8e-42
Percent Identity: 34.3

References

No references are associated with this feature.