Pseudomonas mendocina NK-01, MDS_0115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0115
Name
Replicon chromosome
Genomic location 126984 - 128069 (- strand)

Cross-References

RefSeq YP_004377898.1
GI 330501029
Entrez 10454897
INSDC AEB56146.1
NCBI Locus Tag MDS_0115
UniParc UPI000206EA03
UniProtKB Acc F4DW16
UniProtKB ID F4DW16_PSEMN
UniRef100 UniRef100_F4DW16
UniRef50 UniRef50_P72158
UniRef90 UniRef90_P72158

Product

Feature Type CDS
Coding Frame 1
Product Name
phosphoribosylaminoimidazole carboxylase ATPase subunit
Synonyms
Evidence for Translation
Charge (pH 7) -13.22
Kyte-Doolittle Hydrophobicity Value 0.056
Molecular Weight (kDa) 38.7
Isoelectric Point (pI) 5.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 493 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004978 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0115

Human Homologs

References

No references are associated with this feature.