Pseudomonas mendocina NK-01, MDS_0116

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0116
Name
Replicon chromosome
Genomic location 128214 - 128705 (- strand)

Cross-References

RefSeq YP_004377899.1
GI 330501030
Entrez 10454898
INSDC AEB56147.1
NCBI Locus Tag MDS_0116
UniParc UPI000206EA04
UniProtKB Acc F4DW17
UniProtKB ID F4DW17_PSEMN
UniRef100 UniRef100_F4DW17
UniRef50 UniRef50_P0AG19
UniRef90 UniRef90_Q4K3J9

Product

Feature Type CDS
Coding Frame 1
Product Name
phosphoribosylaminoimidazole carboxylase catalytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) -1.12
Kyte-Doolittle Hydrophobicity Value 0.264
Molecular Weight (kDa) 16.9
Isoelectric Point (pI) 6.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 627 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004979 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0116

Human Homologs

References

No references are associated with this feature.