Pseudomonas mendocina NK-01, MDS_0176

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0176
Name
Replicon chromosome
Genomic location 187273 - 189129 (+ strand)

Cross-References

RefSeq YP_004377959.1
GI 330501090
Entrez 10454958
INSDC AEB56207.1
NCBI Locus Tag MDS_0176
UniParc UPI000206EA7C
UniProtKB Acc F4DWW5
UniProtKB ID F4DWW5_PSEMN
UniRef100 UniRef100_F4DWW5
UniRef50 UniRef50_A4VRS9
UniRef90 UniRef90_F4DWW5

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -18.11
Kyte-Doolittle Hydrophobicity Value -0.497
Molecular Weight (kDa) 68317.2
Isoelectric Point (pI) 4.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 454 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005027 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0176

Human Homologs

References

No references are associated with this feature.