Pseudomonas mendocina NK-01, MDS_0216

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0216
Name
Replicon chromosome
Genomic location 230760 - 231815 (- strand)

Cross-References

RefSeq YP_004377999.1
GI 330501130
Entrez 10454998
INSDC AEB56247.1
NCBI Locus Tag MDS_0216
UniParc UPI000206EAC2
UniProtKB Acc F4DX05
UniProtKB ID F4DX05_PSEMN
UniRef100 UniRef100_F4DX05
UniRef50 UniRef50_P52073
UniRef90 UniRef90_W6QS11

Product

Feature Type CDS
Coding Frame 1
Product Name
glycolate oxidase FAD binding subunit
Synonyms
Evidence for Translation
Charge (pH 7) 2.32
Kyte-Doolittle Hydrophobicity Value -0.188
Molecular Weight (kDa) 37641.6
Isoelectric Point (pI) 7.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 419 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004920 (479 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0216

Human Homologs

References

No references are associated with this feature.