Pseudomonas mendocina NK-01, MDS_0217

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0217
Name
Replicon chromosome
Genomic location 231815 - 233314 (- strand)

Cross-References

RefSeq YP_004378000.1
GI 330501131
Entrez 10454999
INSDC AEB56248.1
NCBI Locus Tag MDS_0217
UniParc UPI000206EAC3
UniProtKB Acc F4DX06
UniProtKB ID F4DX06_PSEMN
UniRef100 UniRef100_F4DX06
UniRef50 UniRef50_P0AEQ0
UniRef90 UniRef90_C1DFQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
glycolate oxidase subunit GlcD
Synonyms
Evidence for Translation
Charge (pH 7) -19.90
Kyte-Doolittle Hydrophobicity Value 0.066
Molecular Weight (kDa) 53812.4
Isoelectric Point (pI) 4.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 547 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004921 (478 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0217

Human Homologs

References

No references are associated with this feature.