Pseudomonas mendocina NK-01, MDS_0302

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0302
Name
Replicon chromosome
Genomic location 320837 - 321910 (+ strand)

Cross-References

RefSeq YP_004378085.1
GI 330501216
Entrez 10455084
INSDC AEB56333.1
NCBI Locus Tag MDS_0302
UniParc UPI000206EB58
UniProtKB Acc F4DXY1
UniProtKB ID F4DXY1_PSEMN
UniRef100 UniRef100_F4DXY1
UniRef50 UniRef50_B9WZ64
UniRef90 UniRef90_W6QPB8

Product

Feature Type CDS
Coding Frame 1
Product Name
alanine racemase
Synonyms
Evidence for Translation
Charge (pH 7) -6.25
Kyte-Doolittle Hydrophobicity Value 0.047
Molecular Weight (kDa) 38955.5
Isoelectric Point (pI) 5.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 560 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004545 (850 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0302
Search term: alanine racemase

Human Homologs

References

No references are associated with this feature.