Pseudomonas mendocina NK-01, MDS_0488

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_0488
Name
Replicon	chromosome
Genomic location	523191 - 524381 (- strand)

Cross-References

RefSeq	YP_004378271.1
GI	330501402
Entrez	10455270
INSDC	AEB56519.1
NCBI Locus Tag	MDS_0488
UniParc	UPI000206E905
UniProtKB Acc	F4DLI9
UniProtKB ID	F4DLI9_PSEMN
UniRef100	UniRef100_F4DLI9
UniRef50	UniRef50_P13444
UniRef90	UniRef90_Q4K4I7

Product

Feature Type	CDS
Coding Frame	1
Product Name	S-adenosylmethionine synthetase
Synonyms
Evidence for Translation
Charge (pH 7)	-9.50
Kyte-Doolittle Hydrophobicity Value	-0.144
Molecular Weight (kDa)	42.7
Isoelectric Point (pI)	5.42

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000530 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_0488 Search term: S-adenosylmethionine synthetase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000361287 methionine adenosyltransferase 1A [Source:HGNC Symbol;Acc:HGNC:6903] E-value: 1.5e-107 Percent Identity: 54.6

References