Pseudomonas mendocina NK-01, MDS_0492

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0492
Name
Replicon chromosome
Genomic location 527736 - 529736 (+ strand)

Cross-References

RefSeq YP_004378275.1
GI 330501406
Entrez 10455274
INSDC AEB56523.1
NCBI Locus Tag MDS_0492
UniParc UPI000206E909
UniProtKB Acc F4DLJ3
UniProtKB ID F4DLJ3_PSEMN
UniRef100 UniRef100_F4DLJ3
UniRef50 UniRef50_P27302
UniRef90 UniRef90_W6QSJ0

Product

Feature Type CDS
Coding Frame 1
Product Name
transketolase
Synonyms
Evidence for Translation
Charge (pH 7) -21.82
Kyte-Doolittle Hydrophobicity Value -0.158
Molecular Weight (kDa) 71714.2
Isoelectric Point (pI) 4.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 606 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000532 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0492
Search term: transketolase

Human Homologs

References

No references are associated with this feature.