Pseudomonas mendocina NK-01, MDS_0645

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0645
Name
Replicon chromosome
Genomic location 692907 - 695612 (- strand)

Cross-References

RefSeq YP_004378428.1
GI 330501559
Entrez 10455427
INSDC AEB56676.1
NCBI Locus Tag MDS_0645
UniParc UPI000206EA1E
UniProtKB Acc F4DNB6
UniProtKB ID F4DNB6_PSEMN
UniRef100 UniRef100_F4DNB6
UniRef50 UniRef50_Q4KJD2
UniRef90 UniRef90_A4XPS7

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -12.79
Kyte-Doolittle Hydrophobicity Value -0.324
Molecular Weight (kDa) 101216.9
Isoelectric Point (pI) 6.27

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 493 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004624 (539 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0645

Human Homologs

References

No references are associated with this feature.