Pseudomonas mendocina NK-01, MDS_0938

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_0938
Name
Replicon chromosome
Genomic location 1041110 - 1041499 (- strand)

Cross-References

RefSeq YP_004378721.1
GI 330501852
Entrez 10455720
INSDC AEB56969.1
NCBI Locus Tag MDS_0938
UniParc UPI000206E705
UniProtKB Acc F4DR67
UniProtKB ID F4DR67_PSEMN
UniRef100 UniRef100_F4DR67
UniRef50 UniRef50_W6QTP9
UniRef90 UniRef90_W6QTP9

Product

Feature Type CDS
Coding Frame 1
Product Name
4-carboxymuconolactone decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7) -3.14
Kyte-Doolittle Hydrophobicity Value -0.322
Molecular Weight (kDa) 14.3
Isoelectric Point (pI) 5.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 248 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000231 (995 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_0938

Human Homologs

References

No references are associated with this feature.