Pseudomonas mendocina NK-01, MDS_1044

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1044
Name
Replicon chromosome
Genomic location 1148179 - 1149123 (+ strand)

Cross-References

RefSeq YP_004378827.1
GI 330501958
Entrez 10455826
INSDC AEB57075.1
NCBI Locus Tag MDS_1044
UniParc UPI000206E76B
UniProtKB Acc F4DSU4
UniProtKB ID F4DSU4_PSEMN
UniRef100 UniRef100_F4DSU4
UniRef50 UniRef50_Q0BYQ0
UniRef90 UniRef90_F4DSU4

Product

Feature Type CDS
Coding Frame 1
Product Name
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Synonyms
Evidence for Translation
Charge (pH 7) -14.69
Kyte-Doolittle Hydrophobicity Value -0.169
Molecular Weight (kDa) 34388.6
Isoelectric Point (pI) 4.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 515 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004216 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1044

Human Homologs

References

No references are associated with this feature.