Pseudomonas mendocina NK-01, MDS_1067

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1067
Name
Replicon chromosome
Genomic location 1171492 - 1172652 (- strand)

Cross-References

RefSeq YP_004378850.1
GI 330501981
Entrez 10455849
INSDC AEB57098.1
NCBI Locus Tag MDS_1067
UniParc UPI000206E782
UniProtKB Acc F4DSW7
UniProtKB ID F4DSW7_PSEMN
UniRef100 UniRef100_F4DSW7
UniRef50 UniRef50_Q8EAU9
UniRef90 UniRef90_A4XR18

Product

Feature Type CDS
Coding Frame 1
Product Name
SMC domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.53
Kyte-Doolittle Hydrophobicity Value -0.242
Molecular Weight (kDa) 42.6
Isoelectric Point (pI) 7.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 122 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000761 (418 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1067

Human Homologs

References

No references are associated with this feature.