Pseudomonas mendocina NK-01, MDS_1114

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1114
Name
Replicon chromosome
Genomic location 1218250 - 1219071 (- strand)

Cross-References

RefSeq YP_004378897.1
GI 330502028
Entrez 10455896
INSDC AEB57145.1
NCBI Locus Tag MDS_1114
UniParc UPI000206E7B0
UniProtKB Acc F4DT14
UniProtKB ID F4DT14_PSEMN
UniRef100 UniRef100_F4DT14
UniRef50 UniRef50_Q8PNU0
UniRef90 UniRef90_Q888C6

Product

Feature Type CDS
Coding Frame 1
Product Name
ribose-phosphate pyrophosphokinase
Synonyms
Evidence for Translation
Charge (pH 7) -5.19
Kyte-Doolittle Hydrophobicity Value 0.105
Molecular Weight (kDa) 29875.0
Isoelectric Point (pI) 5.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 660 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004320 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1114

Human Homologs

Ensembl 110, assembly GRCh38.p14
phosphoribosyl pyrophosphate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:9465]
E-value: 2.2e-73
Percent Identity: 51.3

References

No references are associated with this feature.