Pseudomonas mendocina NK-01, MDS_1214

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1214
Name
Replicon chromosome
Genomic location 1327313 - 1329733 (- strand)

Cross-References

RefSeq YP_004378997.1
GI 330502128
Entrez 10455996
INSDC AEB57245.1
NCBI Locus Tag MDS_1214
UniParc UPI000206E814
UniProtKB Acc F4DUF3
UniProtKB ID F4DUF3_PSEMN
UniRef100 UniRef100_F4DUF3
UniRef50 UniRef50_F4DUF3
UniRef90 UniRef90_F4DUF3

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent siderophore receptor protein
Synonyms
Evidence for Translation
Charge (pH 7) -16.99
Kyte-Doolittle Hydrophobicity Value -0.500
Molecular Weight (kDa) 89345.1
Isoelectric Point (pI) 5.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 301 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG030048 (11 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1214

Human Homologs

References

No references are associated with this feature.