Pseudomonas mendocina NK-01, MDS_1352

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1352
Name
Replicon chromosome
Genomic location 1473540 - 1474103 (+ strand)

Cross-References

RefSeq YP_004379135.1
GI 330502266
Entrez 10456134
INSDC AEB57383.1
NCBI Locus Tag MDS_1352
UniParc UPI000206E680
UniProtKB Acc F4DW65
UniProtKB ID F4DW65_PSEMN
UniRef100 UniRef100_F4DW65
UniRef50 UniRef50_Q02UU0
UniRef90 UniRef90_A4XRX2

Product

Feature Type CDS
Coding Frame 1
Product Name
peroxiredoxin
Synonyms
Evidence for Translation
Charge (pH 7) -4.38
Kyte-Doolittle Hydrophobicity Value -0.214
Molecular Weight (kDa) 20.6
Isoelectric Point (pI) 5.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000137 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1352
Search term: peroxiredoxin

Human Homologs

Ensembl 110, assembly GRCh38.p14
peroxiredoxin 3 [Source:HGNC Symbol;Acc:HGNC:9354]
E-value: 2.2e-32
Percent Identity: 42.5

References

No references are associated with this feature.