Pseudomonas mendocina NK-01, MDS_1513

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1513
Name
Replicon chromosome
Genomic location 1652826 - 1653806 (- strand)

Cross-References

RefSeq YP_004379296.1
GI 330502427
Entrez 10456295
INSDC AEB57544.1
NCBI Locus Tag MDS_1513
UniParc UPI000206DB54
UniProtKB Acc F4DY04
UniProtKB ID F4DY04_PSEMN
UniRef100 UniRef100_F4DY04
UniRef50 UniRef50_C1DL48
UniRef90 UniRef90_W6QZP0

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.61
Kyte-Doolittle Hydrophobicity Value -0.079
Molecular Weight (kDa) 34.9
Isoelectric Point (pI) 5.25

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 178 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000728 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1513

Human Homologs

References

No references are associated with this feature.