Pseudomonas mendocina NK-01, MDS_1514

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1514
Name
Replicon chromosome
Genomic location 1653839 - 1655107 (- strand)

Cross-References

RefSeq YP_004379297.1
GI 330502428
Entrez 10456296
INSDC AEB57545.1
NCBI Locus Tag MDS_1514
UniParc UPI000206DC2D
UniProtKB Acc F4DY05
UniProtKB ID F4DY05_PSEMN
UniRef100 UniRef100_F4DY05
UniRef50 UniRef50_W6QYC2
UniRef90 UniRef90_W6QYC2

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane porin
Synonyms
Evidence for Translation
Charge (pH 7) -8.58
Kyte-Doolittle Hydrophobicity Value -0.276
Molecular Weight (kDa) 46152.1
Isoelectric Point (pI) 5.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 19 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (839 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1514

Human Homologs

References

No references are associated with this feature.