Pseudomonas mendocina NK-01, MDS_1548

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1548
Name
Replicon chromosome
Genomic location 1686912 - 1688147 (- strand)

Cross-References

RefSeq YP_004379331.1
GI 330502462
Entrez 10456330
INSDC AEB57579.1
NCBI Locus Tag MDS_1548
UniParc UPI000206DC4E
UniProtKB Acc F4DY39
UniProtKB ID F4DY39_PSEMN
UniRef100 UniRef100_F4DY39
UniRef50 UniRef50_C9XUW2
UniRef90 UniRef90_W6QY86

Product

Feature Type CDS
Coding Frame 1
Product Name
cytosine deaminase
Synonyms
Evidence for Translation
Charge (pH 7) -8.59
Kyte-Doolittle Hydrophobicity Value -0.201
Molecular Weight (kDa) 45477.4
Isoelectric Point (pI) 6.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 185 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000428 (479 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1548

Human Homologs

References

No references are associated with this feature.