Pseudomonas mendocina NK-01, MDS_1642

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1642
Name
Replicon chromosome
Genomic location 1790355 - 1790882 (+ strand)

Cross-References

RefSeq YP_004379425.1
GI 330502556
Entrez 10456424
INSDC AEB57673.1
NCBI Locus Tag MDS_1642
UniParc UPI000206DF1A
UniProtKB Acc F4DZ18
UniProtKB ID F4DZ18_PSEMN
UniRef100 UniRef100_F4DZ18
UniRef50 UniRef50_A0A059ZIL0
UniRef90 UniRef90_F4DZ18

Product

Feature Type CDS
Coding Frame 1
Product Name
ErfK/YbiS/YcfS/YnhG family protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.07
Kyte-Doolittle Hydrophobicity Value -0.297
Molecular Weight (kDa) 19576.2
Isoelectric Point (pI) 8.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 84 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG023253 (73 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1642

Human Homologs

References

No references are associated with this feature.