Pseudomonas mendocina NK-01, MDS_1703

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1703
Name
Replicon chromosome
Genomic location 1852083 - 1852643 (- strand)

Cross-References

RefSeq YP_004379486.1
GI 330502617
Entrez 10456485
INSDC AEB57734.1
NCBI Locus Tag MDS_1703
UniParc UPI000206E0F7
UniProtKB Acc F4DZW8
UniProtKB ID F4DZW8_PSEMN
UniRef100 UniRef100_F4DZW8
UniRef50 UniRef50_D0SXB4
UniRef90 UniRef90_U1UC60

Product

Feature Type CDS
Coding Frame 1
Product Name
PfpI family intracellular peptidase
Synonyms
Evidence for Translation
Charge (pH 7) -7.58
Kyte-Doolittle Hydrophobicity Value -0.210
Molecular Weight (kDa) 19.9
Isoelectric Point (pI) 4.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 442 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000346 (1222 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1703

Human Homologs

References

No references are associated with this feature.