Pseudomonas mendocina NK-01, MDS_1823

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_1823
Name
Replicon	chromosome
Genomic location	2001851 - 2002537 (+ strand)

Cross-References

RefSeq	YP_004379606.1
GI	330502737
Entrez	10456605
INSDC	AEB57854.1
NCBI Locus Tag	MDS_1823
UniParc	UPI000206E39E
UniProtKB Acc	F4DLY6
UniProtKB ID	F4DLY6_PSEMN
UniRef100	UniRef100_F4DLY6
UniRef50	UniRef50_Q52081
UniRef90	UniRef90_F4DLY6

Product

Feature Type	CDS
Coding Frame	1
Product Name	flagellar basal body L-ring protein
Synonyms
Evidence for Translation
Charge (pH 7)	-2.04
Kyte-Doolittle Hydrophobicity Value	-0.125
Molecular Weight (kDa)	23892.4
Isoelectric Point (pI)	4.91

Subcellular localization

Individual Mappings	Localization Confidence PMID Flagellar Note: This is based on PSORTb V3.0 secondary localization prediction Class 3 20472543 Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 234 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001045 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_1823 Search term: flagellar basal body L-ring protein

Human Homologs

References