Strain |
Pseudomonas mendocina NK-01
GCF_000204295.1|latest |
Locus Tag |
MDS_1845
|
Name |
|
Replicon | chromosome |
Genomic location | 2028606 - 2030081 (+ strand) |
RefSeq | YP_004379628.1 |
GI | 330502759 |
Entrez | 10456627 |
NCBI Locus Tag | MDS_1845 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
sigma-54 dependent transcription regulator
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -12.40 |
Kyte-Doolittle Hydrophobicity Value | -0.366 |
Molecular Weight (kDa) | 55513.8 |
Isoelectric Point (pI) | 5.25 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
5EXX | TRANSCRIPTION | 11/24/15 | AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to c-di-GMP | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) | 3.311 | X-RAY DIFFRACTION | 94.4 |
7EJW | TRANSCRIPTION | 04/02/21 | Crystal structure of FleN in complex with FleQ AAA+ doamain | Pseudomonas aeruginosa PAO1 | 1.98 | X-RAY DIFFRACTION | 95.3 |
6JDL | TRANSCRIPTION | 02/01/19 | Central domain of FleQ H287A mutant in complex with ATPgS and Mg | Pseudomonas aeruginosa | 2.249 | X-RAY DIFFRACTION | 95.0 |
5EXP | TRANSCRIPTION | 11/24/15 | AAA+ domain of FleQ from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.8 | X-RAY DIFFRACTION | 95.7 |
6J7E | TRANSCRIPTION | 01/18/19 | Crystal Structure of Central domain of FleQ in complex with ATPgS and Mg | Pseudomonas aeruginosa | 2.4 | X-RAY DIFFRACTION | 95.4 |
6JDI | TRANSCRIPTION | 02/01/19 | Central domain of FleQ H287N mutant in complex with ATPgS and Mg | Pseudomonas aeruginosa | 1.95 | X-RAY DIFFRACTION | 95.0 |
5EXS | TRANSCRIPTION | 11/24/15 | AAA+ ATPase FleQ from Pseudomonas aeruginosa bound to ATP-gamma-S | Pseudomonas aeruginosa | 2.5 | X-RAY DIFFRACTION | 95.7 |
5EXT | TRANSCRIPTION | 11/24/15 | AAA+ domain of FleQ from Pseudomonas aeruginosa bound to ADP | Pseudomonas aeruginosa | 2.4 | X-RAY DIFFRACTION | 95.7 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 454 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG001058 (532 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: MDS_1845
Search term: sigma-54 dependent transcription regulator
|