Pseudomonas mendocina NK-01, MDS_1982

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1982
Name
Replicon chromosome
Genomic location 2185153 - 2186706 (- strand)

Cross-References

RefSeq YP_004379765.1
GI 330502896
Entrez 10456764
INSDC AEB58013.1
NCBI Locus Tag MDS_1982
UniParc UPI000206DA6D
UniProtKB Acc F4DNR8
UniProtKB ID F4DNR8_PSEMN
UniRef100 UniRef100_F4DNR8
UniRef50 UniRef50_B3Q5E0
UniRef90 UniRef90_A4XVX5

Product

Feature Type CDS
Coding Frame 1
Product Name
EmrB/QacA family drug resistance transporter
Synonyms
Evidence for Translation
Charge (pH 7) 0.07
Kyte-Doolittle Hydrophobicity Value 0.664
Molecular Weight (kDa) 56.0
Isoelectric Point (pI) 7.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 469 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002463 (912 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1982

Human Homologs

References

No references are associated with this feature.