Pseudomonas mendocina NK-01, MDS_1985

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_1985
Name
Replicon	chromosome
Genomic location	2188808 - 2190289 (+ strand)

Cross-References

RefSeq	YP_004379768.1
GI	330502899
Entrez	10456767
INSDC	AEB58016.1
NCBI Locus Tag	MDS_1985
UniParc	UPI000206DA70
UniProtKB Acc	F4DPF8
UniProtKB ID	F4DPF8_PSEMN
UniRef100	UniRef100_F4DPF8
UniRef50	UniRef50_Q9XCL6
UniRef90	UniRef90_A4XVX2

Product

Feature Type	CDS
Coding Frame	1
Product Name	glutamyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7)	-3.82
Kyte-Doolittle Hydrophobicity Value	-0.307
Molecular Weight (kDa)	56370.6
Isoelectric Point (pI)	6.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 668 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002464 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_1985 Search term: glutamyl-tRNA synthetase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000395196 glutamyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:29419] E-value: 1.6e-74 Percent Identity: 34.1
Ensembl 110, assembly GRCh38.p14	ENSP00000501251 glutamyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:29419] E-value: 1.6e-74 Percent Identity: 34.1

References