Pseudomonas mendocina NK-01, MDS_2014

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2014
Name
Replicon chromosome
Genomic location 2224313 - 2225146 (+ strand)

Cross-References

RefSeq YP_004379797.1
GI 330502928
Entrez 10456796
INSDC AEB58045.1
NCBI Locus Tag MDS_2014
UniParc UPI000206DB5D
UniProtKB Acc F4DPI7
UniProtKB ID F4DPI7_PSEMN
UniRef100 UniRef100_F4DPI7
UniRef50 UniRef50_Q88GU3
UniRef90 UniRef90_A4XVU3

Product

Feature Type CDS
Coding Frame 1
Product Name
extracellular solute-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -9.16
Kyte-Doolittle Hydrophobicity Value -0.096
Molecular Weight (kDa) 30.8
Isoelectric Point (pI) 4.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 67 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002672 (528 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2014

Human Homologs

References

No references are associated with this feature.