Pseudomonas mendocina NK-01, MDS_2186

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2186
Name
Replicon chromosome
Genomic location 2393669 - 2393962 (- strand)

Cross-References

RefSeq YP_004379969.1
GI 330503100
Entrez 10456968
INSDC AEB58217.1
NCBI Locus Tag MDS_2186
UniParc UPI000206DF47
UniProtKB Acc F4DRD4
UniProtKB ID F4DRD4_PSEMN
UniRef100 UniRef100_F4DRD4
UniRef50 UniRef50_I7JC11
UniRef90 UniRef90_F4DRD4

Product

Feature Type CDS
Coding Frame 1
Product Name
PaaR repeat-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.82
Kyte-Doolittle Hydrophobicity Value 0.075
Molecular Weight (kDa) 9607.6
Isoelectric Point (pI) 7.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 31 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016658 (10 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2186

Human Homologs

References

No references are associated with this feature.