Pseudomonas mendocina NK-01, MDS_2220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2220
Name
Replicon chromosome
Genomic location 2428811 - 2429569 (+ strand)

Cross-References

RefSeq YP_004380003.1
GI 330503134
Entrez 10457002
INSDC AEB58251.1
NCBI Locus Tag MDS_2220
UniParc UPI000206E03D
UniProtKB Acc F4DS52
UniProtKB ID F4DS52_PSEMN
UniRef100 UniRef100_F4DS52
UniRef50 UniRef50_P03007
UniRef90 UniRef90_W6R354

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase III subunit epsilon
Synonyms
Evidence for Translation
Charge (pH 7) -9.16
Kyte-Doolittle Hydrophobicity Value -0.361
Molecular Weight (kDa) 27.8
Isoelectric Point (pI) 5.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 494 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003582 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2220

Human Homologs

References

No references are associated with this feature.