Pseudomonas mendocina NK-01, MDS_2344

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2344
Name
Replicon chromosome
Genomic location 2564540 - 2565301 (+ strand)

Cross-References

RefSeq YP_004380127.1
GI 330503258
Entrez 10457126
INSDC AEB58375.1
NCBI Locus Tag MDS_2344
UniParc UPI000206E3AD
UniProtKB Acc F4DT65
UniProtKB ID F4DT65_PSEMN
UniRef100 UniRef100_F4DT65
UniRef50 UniRef50_Q8XAZ2
UniRef90 UniRef90_A4XV15

Product

Feature Type CDS
Coding Frame 1
Product Name
trans-aconitate 2-methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -3.87
Kyte-Doolittle Hydrophobicity Value -0.169
Molecular Weight (kDa) 28190.6
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 228 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG022677 (55 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2344

Human Homologs

References

No references are associated with this feature.