Pseudomonas mendocina NK-01, MDS_2670

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2670
Name
Replicon chromosome
Genomic location 2924521 - 2925018 (+ strand)

Cross-References

RefSeq YP_004380453.1
GI 330503584
Entrez 10457452
INSDC AEB58701.1
NCBI Locus Tag MDS_2670
UniParc UPI000206DE7E
UniProtKB Acc F4DWK2
UniProtKB ID F4DWK2_PSEMN
UniRef100 UniRef100_F4DWK2
UniRef50 UniRef50_Q9HZY5
UniRef90 UniRef90_A4XVF1

Product

Feature Type CDS
Coding Frame 1
Product Name
transcription elongation factor GreB
Synonyms
Evidence for Translation
Charge (pH 7) -0.31
Kyte-Doolittle Hydrophobicity Value -0.685
Molecular Weight (kDa) 18.7
Isoelectric Point (pI) 6.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 498 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002710 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2670

Human Homologs

References

No references are associated with this feature.