Pseudomonas mendocina NK-01, MDS_2697

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2697
Name
Replicon chromosome
Genomic location 2960152 - 2961063 (- strand)

Cross-References

RefSeq YP_004380480.1
GI 330503611
Entrez 10457479
INSDC AEB58728.1
NCBI Locus Tag MDS_2697
UniParc UPI000206DF61
UniProtKB Acc F4DXB9
UniProtKB ID F4DXB9_PSEMN
UniRef100 UniRef100_F4DXB9
UniRef50 UniRef50_Q9I0Z0
UniRef90 UniRef90_A4XUE5

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -3.81
Kyte-Doolittle Hydrophobicity Value -0.057
Molecular Weight (kDa) 33459.0
Isoelectric Point (pI) 5.12

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 241 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016442 (134 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2697

Human Homologs

References

No references are associated with this feature.