Pseudomonas mendocina NK-01, MDS_2704

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2704
Name
Replicon chromosome
Genomic location 2965895 - 2966893 (+ strand)

Cross-References

RefSeq YP_004380487.1
GI 330503618
Entrez 10457486
INSDC AEB58735.1
NCBI Locus Tag MDS_2704
UniParc UPI000206DF68
UniProtKB Acc F4DXC6
UniProtKB ID F4DXC6_PSEMN
UniRef100 UniRef100_F4DXC6
UniRef50 UniRef50_I4F3N4
UniRef90 UniRef90_F4DXC6

Product

Feature Type CDS
Coding Frame 1
Product Name
transport system permease
Synonyms
Evidence for Translation
Charge (pH 7) 4.86
Kyte-Doolittle Hydrophobicity Value 1.030
Molecular Weight (kDa) 34074.4
Isoelectric Point (pI) 9.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 551 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001541 (706 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2704

Human Homologs

References

No references are associated with this feature.